This might mean something...

[wrgraves]

Re: Bind upgrade producing errors on pfsense 2.5 upgrade

[2.5.0-RELEASE][root@pfSense.localdomain]/root: named-checkconf -tv /cf/named /etc/namedb/named.conf
isc_dir_chroot: file not found

and here is the ls -laR /cf/named
total 21
drwxr-xr-x 6 root wheel 512 Jun 11 2020 .
drwxr-xr-x 4 root wheel 512 Feb 8 05:44 ..
dr-xr-xr-x 11 root wheel 512 Feb 17 11:08 dev
drwxr-xr-x 3 root wheel 512 Sep 11 2019 etc
drwxr-xr-x 3 root wheel 512 Jun 11 2020 usr
drwxr-xr-x 6 root wheel 512 Sep 11 2019 var

/cf/named/dev:
total 0
crw-rw-rw- 1 root wheel 0xe Feb 18 07:22 null
crw-r--r-- 1 root wheel 0x4 Feb 17 10:58 random
lrwxr-xr-x 1 root wheel 6 Feb 17 11:08 urandom -> random
crw-rw-rw- 1 root wheel 0xf Feb 17 10:58 zero

/cf/named/etc:
total 16
drwxr-xr-x 3 root wheel 512 Sep 11 2019 .
drwxr-xr-x 6 root wheel 512 Jun 11 2020 ..
-rw-r--r-- 1 root wheel 2294 Sep 11 2019 localtime
drwxr-xr-x 4 bind wheel 512 Feb 17 10:43 namedb

/cf/named/etc/namedb:
total 28
drwxr-xr-x 4 bind wheel 512 Feb 17 10:43 .
drwxr-xr-x 3 root wheel 512 Sep 11 2019 ..
drwxr-xr-x 2 bind wheel 512 Sep 11 2019 keys
drwxr-xr-x 3 bind wheel 512 Sep 11 2019 master
-rw-r--r-- 1 root wheel 1953 Feb 17 22:47 named.conf
-rw-r--r-- 1 root wheel 3317 Sep 11 2019 named.root
-rw-r--r-- 1 root wheel 163 Feb 17 22:47 rndc.conf

/cf/named/etc/namedb/keys:
total 24
drwxr-xr-x 2 bind wheel 512 Sep 11 2019 .
drwxr-xr-x 4 bind wheel 512 Feb 17 10:43 ..
-rw-r--r-- 1 bind wheel 341 Sep 11 2019 Klocaldomain.+013+25723.key
-rw------- 1 bind wheel 187 Sep 11 2019 Klocaldomain.+013+25723.private
-rw-r--r-- 1 bind wheel 342 Sep 11 2019 Klocaldomain.+013+39257.key
-rw------- 1 bind wheel 187 Sep 11 2019 Klocaldomain.+013+39257.private

/cf/named/etc/namedb/master:
total 12
drwxr-xr-x 3 bind wheel 512 Sep 11 2019 .
drwxr-xr-x 4 bind wheel 512 Feb 17 10:43 ..
drwxr-xr-x 2 bind wheel 512 Feb 10 05:15 Lan

/cf/named/etc/namedb/master/Lan:
total 84
drwxr-xr-x 2 bind wheel 512 Feb 10 05:15 .
drwxr-xr-x 3 bind wheel 512 Sep 11 2019 ..
-rw-r--r-- 1 root wheel 376 Feb 17 22:46 0.0.127.DB
-rw-r--r-- 1 root wheel 1449 Feb 17 22:41 2.16.172.DB
-rw-r--r-- 1 root wheel 1574 Feb 17 22:38 localdomain.DB
-rw-r--r-- 1 bind wheel 512 Sep 12 2019 localdomain.DB.jbk
-rw-r--r-- 1 bind wheel 16525 Feb 10 05:15 localdomain.DB.signed
-rw-r--r-- 1 bind wheel 35284 Feb 10 05:02 localdomain.DB.signed.jnl
-rw-r--r-- 1 root wheel 482 Feb 17 22:43 localhost.DB

/cf/named/usr:
total 12
drwxr-xr-x 3 root wheel 512 Jun 11 2020 .
drwxr-xr-x 6 root wheel 512 Jun 11 2020 ..
drwxr-xr-x 3 root wheel 512 Jun 11 2020 local

/cf/named/usr/local:
total 12
drwxr-xr-x 3 root wheel 512 Jun 11 2020 .
drwxr-xr-x 3 root wheel 512 Jun 11 2020 ..
drwxr-xr-x 3 root wheel 512 Feb 17 22:47 lib

/cf/named/usr/local/lib:
total 12
drwxr-xr-x 3 root wheel 512 Feb 17 22:47 .
drwxr-xr-x 3 root wheel 512 Jun 11 2020 ..
drwxr-xr-x 2 root wheel 512 Feb 17 22:47 named

/cf/named/usr/local/lib/named:
total 32
drwxr-xr-x 2 root wheel 512 Feb 17 22:47 .
drwxr-xr-x 3 root wheel 512 Feb 17 22:47 ..
-rw-r--r-- 1 root wheel 23752 Feb 17 22:47 filter-aaaa.so

/cf/named/var:
total 24
drwxr-xr-x 6 root wheel 512 Sep 11 2019 .
drwxr-xr-x 6 root wheel 512 Jun 11 2020 ..
drwxr-xr-x 2 root wheel 512 Sep 11 2019 dump
drwxr-xr-x 2 bind bind 512 Sep 11 2019 log
drwxr-xr-x 3 root wheel 512 Sep 11 2019 run
drwxr-xr-x 2 root wheel 512 Sep 11 2019 stats

/cf/named/var/dump:
total 8
drwxr-xr-x 2 root wheel 512 Sep 11 2019 .
drwxr-xr-x 6 root wheel 512 Sep 11 2019 ..

/cf/named/var/log:
total 8
drwxr-xr-x 2 bind bind 512 Sep 11 2019 .
drwxr-xr-x 6 root wheel 512 Sep 11 2019 ..

/cf/named/var/run:
total 12
drwxr-xr-x 3 root wheel 512 Sep 11 2019 .
drwxr-xr-x 6 root wheel 512 Sep 11 2019 ..
drwxr-xr-x 2 bind wheel 512 Feb 17 22:50 named

/cf/named/var/run/named:
total 16
drwxr-xr-x 2 bind wheel 512 Feb 17 22:50 .
drwxr-xr-x 3 root wheel 512 Sep 11 2019 ..
-rw-r--r-- 1 bind wheel 6 Feb 17 22:50 pid
-rw------- 1 bind wheel 102 Feb 17 22:50 session.key

/cf/named/var/stats:
total 8
drwxr-xr-x 2 root wheel 512 Sep 11 2019 .
drwxr-xr-x 6 root wheel 512 Sep 11 2019 ..
[2.5.0-RELEASE][root@pfSense.localdomain]/root:

[wrgraves]

I screwed up here, this should be part of
Bind upgrade producing errors on pfsense 2.5 upgrade