By time you check it might have been resolved, but the client did not get a answer and neg cached it, so doesn't even ask for it again. Clients all have their own dns cache, browsers have their own cache as well, etc.
If you having an issue from a client with sites (fqdn) do a query from the client for that fqdn, does it resolve? look in the clients local cache with windows you can do it with.
/displaydns Display the contents of the DNS Resolver Cache.
Restart you browser.
To the settings that should be enabled until 2.2.1 makes them default you can check out https://redmine.pfsense.org/issues/4402
If your having issue with the resolver and speed, etc. Try changing over to the old forwarder(dnsmasq) vs resolver (unbound), enable the forwarder mode in resolver, etc. Possible your isp is doing something underhanded with dns queries and that could cause your resolver problems.